Plot alternative-estimation replications

Visualize replicate estimates from bootstrap, jackknife, or permutation output on a single base R figure.

Usage

# S3 method for class 'mars_boot'
plot(
  x,
  terms = NULL,
  xlab = "Estimate",
  ylab = "Frequency",
  main = NULL,
  breaks = "Sturges",
  col = "grey85",
  border = "white",
  panel_layout = NULL,
  ...
)

Arguments

x

A "mars_boot" object created by compute_alt_stats().

terms

Optional character vector of terms to plot. Defaults to the fixed effect terms stored in the model summary when available, otherwise all replicated terms.

xlab

Label for the x-axis.

ylab

Label for the y-axis.

main

Optional plot title. If NULL, a title is generated from the alternative-estimation type.

breaks

Histogram breaks passed to hist().

col

Fill color for the histograms.

border

Border color for the histograms.

panel_layout

Optional length-2 numeric vector giving the mfrow panel layout. By default a near-square layout is chosen.

...

Additional arguments passed to the underlying base plotting call.

Value

Invisibly returns the matrix of replicated estimates that was plotted.

Examples

# \donttest{
boot_reps <- replicate_bootstrap(
  number_bootstraps = 5,
  data = teacher_expectancy,
  studyID = "study",
  effectID = NULL,
  sample_size = NULL,
  formula = yi ~ 1,
  variance = "vi",
  varcov_type = "univariate",
  structure = "univariate"
)
boot_stats <- compute_alt_stats(boot_reps)
plot(boot_stats, terms = "(Intercept)")

# }